Source code installation with Miniconda

Miniconda installation

Follow official website instruction to install miniconda :

http://conda.pydata.org/miniconda.html

On Linux / Ubuntu / MacOS

Create virtual environment and activate it

conda create --name eartrack python
source activate eartrack

Dependencies install

conda install -c conda-forge numpy matplotlib opencv scikit-image
conda install -c openalea openalea.deploy openalea.core

(Optional) Package managing tools :

conda install -c conda-forge notebook nose sphinx sphinx_rtd_theme

Eartrack install

git clone https://github.com/openalea/eartrack.git
cd eartrack
python setup.py install --prefix=$CONDA_PREFIX

On Windows

Create virtual environment and activate it

conda create --name eartrack python
activate eartrack

Dependencies install

conda install -c conda-forge numpy matplotlib scikit-image opencv pywin32
conda install -c openalea openalea.deploy openalea.core

(Optional) Package managing tools :

conda install -c conda-forge notebook nose sphinx sphinx_rtd_theme

Eartrack install

git clone https://github.com/openalea/eartrack.git
cd eartrack
python setup.py install --prefix=%CONDA_PREFIX%